Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891252.1_cds_XP_016445993.1_40897
CDS Infomation

[gene=LOC107771176] [db_xref=GeneID:107771176] [protein=calmodulin-binding protein 60 B-like isoform X2] [protein_id=XP_016445993.1] [location=complement(join(70116..70654,71479..71716,72021..72224,72324..72484,72576..73069,73298..73356,74184..74259,75473..75561))] [gbkey=CDS]
Sequence

ATGCAAACGAGGTATGTGGACAAACGTGCTTTGGATCCAAGTAGTAGTGAGGAAGGTCAA
CCTGAAAGGAAAAGACCTGCTCTTGCTAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGT
CTGCAGAAACTCTGCTCATCACTGGAACCAATTCTTCGAAGAGTTGTTAGTGAAGAAGTT
GAGCGTGCTTTGGCTAAACTTGGTCCTGCTAAACTTAATGCAAGGGTTTCTCCAAAAAGA
ATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCT
CTCTTCACAGGAGGAAAAGTAGAAGGAGAGCAGGGTTCTGCGATACATATTGTCTTGATT
GATGGAAATACAAACCATGTTGTAACATCAGGTCCAGAGTCCTCAGTTAAACTAGATATT
GTTGTGCTTGAAGGAGATTTCAATGACGAGGATGATGATGGCTGGACTCAAGAAAAATTT
GAGTCTCATATAGTAAAGGAGCGCGAAGGAAAAAGGCCTCTTCTTACTGGAGAATTGCAA
GTGATATTGAAGGACGGTGTTGGCACTCTTGGTGAGTTGACGTTTACTGACAACTCCAGC
TGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAAGTTGCATCAGGTTGTTGTGAGGGA
ATTCGCATCCGTGAGGCAAAAACGGATGCCTTCACTGTCAAGGATCATAGAGGAGAATTG
TACAAGAAACATTATCCACCTGCATTAGATGATGAGGTTTGGAGATTGGAAAAGATAGGG
AAAGATGGATCCTTCCATAAGAGGCTAAATAAAGCTGGTATACATAAAGTGGAAGACTTC
CTGCGACTTGTTGTGAGAGACTCGCAGAGGCTCCGTAATATCCTGGGAAGTGGAATGTCA
AATAAGATGTGGGATGCTCTTGTGGAGCATGCAAAAACCTGTGTTCTAGGTGGGAAGCTT
TATGTCTATTATCCTGATGATATGAGAAATGTTGGTGTTGTCTTTAACAATATCTACGAG
TTATGTGGTTTAATCTCTGGTGGGCAGTATCATTCAGTTGATTCTCTTTCAGAAAATCAG
AAGGTATATGTGGATACTTTAGTCAAGAAGGCATATGAAAACTGGATGCATGTCGTTGAG
TATGATGGAAAATCTCTTTTAAGCCTGGGCCAGAATAAACCCTCAGTTACTTCTCAAAAT
GATCTTACAATTGGCTCTCAGAACCATTCGACCTCTTTTGATCAACAAATTAATTTACCA
AGTCTTCCAGCTTCAATTTCATCGGAGCAGCCTGCTATGAATACAGGACTGAATATGGGA
GGGTATAATGATAGCCTCAGTAGCAGATATACCATGCAGCCTCATCTAAATGGCAACATG
CAGGTAAATGGTGCTTCATTTCCTCCTCAGAACCATTTGCTAGGTACGTCACAGCAAGCT
CAGCCACATGGAAGTGAGAGCATGCTGGCTCTTCGCCCACCACAGCCGTCAATGTCTAGC
TATTTTGCTGCTAGCACGCCTAATCCATATAGGGGAGCTGAAGACTTCTTAACAGAGGAA
GAAATACGTATGAGAAGTCATGAGATGCTTGAAAATGAGGACATGCAACATCTGCTCCGT
ATTTTCAGCATGGGACAAGGTCATGCTTCTTCTAGTGTTGGAGAAGAGAATTACCAGTAT
GGATCATCATACATGCCCAACATGTCTTCTACCTTCGGTTTTGATGAGGACCGGACACGT
TCTTCAGGTAAGGCCGTTGTCGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATC
TTCATCAGGAAGAAAGCTGCTGAAAGAAGAGCACAAATTGTTGAATTGGATGACTCCTAG

Peptide Sequence

PEP ID

XP_016445993.1
PEP Infomation

PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Nicotiana tabacum]
Sequence

MQTRYVDKRALDPSSSEEGQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEV
ERALAKLGPAKLNARVSPKRIEGPDGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLI
DGNTNHVVTSGPESSVKLDIVVLEGDFNDEDDDGWTQEKFESHIVKEREGKRPLLTGELQ
VILKDGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGIRIREAKTDAFTVKDHRGEL
YKKHYPPALDDEVWRLEKIGKDGSFHKRLNKAGIHKVEDFLRLVVRDSQRLRNILGSGMS
NKMWDALVEHAKTCVLGGKLYVYYPDDMRNVGVVFNNIYELCGLISGGQYHSVDSLSENQ
KVYVDTLVKKAYENWMHVVEYDGKSLLSLGQNKPSVTSQNDLTIGSQNHSTSFDQQINLP
SLPASISSEQPAMNTGLNMGGYNDSLSSRYTMQPHLNGNMQVNGASFPPQNHLLGTSQQA
QPHGSESMLALRPPQPSMSSYFAASTPNPYRGAEDFLTEEEIRMRSHEMLENEDMQHLLR
IFSMGQGHASSSVGEENYQYGSSYMPNMSSTFGFDEDRTRSSGKAVVGWLKLKAALRWGI
FIRKKAAERRAQIVELDDS

Transcript Sequence

Gene sequence data has not been registered.